TimeXNet Web - Identify active gene networks and pathways using time-course biological data

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KEGG Pathway Enrichment

Job Name:

Phosphoproteome of mouse WT BMDCs stimulated with LPS

Current Gene List:

Input Gene List

Background List:

Whole Genome

137 chart records

Note: Only the top 1000 records are shown here

Category	Term	Count	%	P-value	Benjamini
KEGG_PATHWAY	mmu04668:TNF signaling pathway	65	7.8	3.9e-44	8.7e-42
KEGG_PATHWAY	mmu05161:Hepatitis B	73	8.8	1.5e-42	1.6e-40
KEGG_PATHWAY	mmu04010:MAPK signaling pathway	95	11.4	1.8e-42	1.3e-40
KEGG_PATHWAY	mmu04380:Osteoclast differentiation	67	8.0	3.5e-41	1.9e-39
KEGG_PATHWAY	mmu04660:T cell receptor signaling pathway	59	7.1	2.7e-38	1.2e-36
KEGG_PATHWAY	mmu05169:Epstein-Barr virus infection	83	10.0	5.5e-38	2.0e-36
KEGG_PATHWAY	mmu05164:Influenza A	74	8.9	9.4e-38	3.0e-36
KEGG_PATHWAY	mmu04620:Toll-like receptor signaling pathway	57	6.8	8.4e-37	2.3e-35
KEGG_PATHWAY	mmu04722:Neurotrophin signaling pathway	61	7.3	2.0e-35	4.9e-34
KEGG_PATHWAY	mmu05142:Chagas disease (American trypanosomiasis)	55	6.6	8.2e-34	1.8e-32
KEGG_PATHWAY	mmu05162:Measles	62	7.4	4.2e-33	8.4e-32
KEGG_PATHWAY	mmu05200:Pathways in cancer	106	12.7	2.4e-32	4.5e-31
KEGG_PATHWAY	mmu05210:Colorectal cancer	43	5.2	4.3e-32	7.3e-31
KEGG_PATHWAY	mmu05145:Toxoplasmosis	55	6.6	3.9e-31	6.2e-30
KEGG_PATHWAY	mmu04664:Fc epsilon RI signaling pathway	43	5.2	1.7e-30	2.6e-29
KEGG_PATHWAY	mmu05212:Pancreatic cancer	42	5.0	2.5e-30	3.6e-29
KEGG_PATHWAY	mmu04662:B cell receptor signaling pathway	43	5.2	9.5e-30	1.2e-28
KEGG_PATHWAY	mmu05205:Proteoglycans in cancer	70	8.4	2.1e-28	2.6e-27
KEGG_PATHWAY	mmu05220:Chronic myeloid leukemia	42	5.0	8.5e-28	1.0e-26
KEGG_PATHWAY	mmu05215:Prostate cancer	46	5.5	1.0e-27	1.2e-26
KEGG_PATHWAY	mmu04064:NF-kappa B signaling pathway	48	5.8	1.5e-27	1.6e-26
KEGG_PATHWAY	mmu04210:Apoptosis	38	4.6	6.1e-27	6.2e-26
KEGG_PATHWAY	mmu04370:VEGF signaling pathway	38	4.6	6.1e-27	6.2e-26
KEGG_PATHWAY	mmu05160:Hepatitis C	55	6.6	3.5e-26	3.4e-25
KEGG_PATHWAY	mmu04012:ErbB signaling pathway	44	5.3	9.8e-26	9.1e-25
KEGG_PATHWAY	mmu04510:Focal adhesion	66	7.9	1.4e-24	1.3e-23
KEGG_PATHWAY	mmu05213:Endometrial cancer	33	4.0	2.1e-23	1.8e-22
KEGG_PATHWAY	mmu05133:Pertussis	38	4.6	1.6e-22	1.3e-21
KEGG_PATHWAY	mmu05203:Viral carcinogenesis	67	8.0	2.2e-22	1.7e-21
KEGG_PATHWAY	mmu05166:HTLV-I infection	74	8.9	2.8e-22	2.1e-21
KEGG_PATHWAY	mmu05221:Acute myeloid leukemia	33	4.0	5.3e-22	4.0e-21
KEGG_PATHWAY	mmu04068:FoxO signaling pathway	50	6.0	5.5e-22	4.0e-21
KEGG_PATHWAY	mmu04917:Prolactin signaling pathway	37	4.4	1.1e-21	7.7e-21
KEGG_PATHWAY	mmu04650:Natural killer cell mediated cytotoxicity	44	5.3	1.1e-21	7.5e-21
KEGG_PATHWAY	mmu04670:Leukocyte transendothelial migration	47	5.6	1.6e-21	1.1e-20
KEGG_PATHWAY	mmu05214:Glioma	34	4.1	1.8e-20	1.1e-19
KEGG_PATHWAY	mmu04151:PI3K-Akt signaling pathway	81	9.7	3.5e-20	2.2e-19
KEGG_PATHWAY	mmu04071:Sphingolipid signaling pathway	45	5.4	2.9e-19	1.8e-18
KEGG_PATHWAY	mmu05222:Small cell lung cancer	37	4.4	4.0e-19	2.3e-18
KEGG_PATHWAY	mmu05140:Leishmaniasis	32	3.8	1.5e-18	8.7e-18
KEGG_PATHWAY	mmu05223:Non-small cell lung cancer	30	3.6	1.9e-18	1.0e-17
KEGG_PATHWAY	mmu04520:Adherens junction	33	4.0	1.0e-17	5.7e-17
KEGG_PATHWAY	mmu04915:Estrogen signaling pathway	38	4.6	2.0e-17	1.1e-16
KEGG_PATHWAY	mmu04621:NOD-like receptor signaling pathway	29	3.5	2.5e-17	1.3e-16
KEGG_PATHWAY	mmu04015:Rap1 signaling pathway	57	6.8	3.3e-17	1.7e-16
KEGG_PATHWAY	mmu05152:Tuberculosis	51	6.1	4.5e-17	2.2e-16
KEGG_PATHWAY	mmu04062:Chemokine signaling pathway	54	6.5	5.2e-17	2.5e-16
KEGG_PATHWAY	mmu05231:Choline metabolism in cancer	38	4.6	6.5e-17	5.6e-16
KEGG_PATHWAY	mmu04919:Thyroid hormone signaling pathway	40	4.8	9.9e-17	5.6e-16
KEGG_PATHWAY	mmu04666:Fc gamma R-mediated phagocytosis	34	4.1	2.9e-16	1.6e-15
KEGG_PATHWAY	mmu04910:Insulin signaling pathway	44	5.3	4.5e-16	2.0e-15
KEGG_PATHWAY	mmu05168:Herpes simplex infection	54	6.5	1.0e-15	4.3e-15
KEGG_PATHWAY	mmu05132:Salmonella infection	32	3.8	1.8e-15	7.7e-15
KEGG_PATHWAY	mmu04810:Regulation of actin cytoskeleton	54	6.5	3.8e-15	1.6e-14
KEGG_PATHWAY	mmu04611:Platelet activation	41	4.9	5.6e-15	2.3e-14
KEGG_PATHWAY	mmu04066:HIF-1 signaling pathway	36	4.3	1.1e-14	4.4e-14
KEGG_PATHWAY	mmu04622:RIG-I-like receptor signaling pathway	29	3.5	1.4e-14	5.8e-14
KEGG_PATHWAY	mmu04150:mTOR signaling pathway	27	3.2	1.8e-14	7.0e-14
KEGG_PATHWAY	mmu04014:Ras signaling pathway	55	6.6	1.9e-14	7.4e-14
KEGG_PATHWAY	mmu04550:Signaling pathways regulating pluripotency of stem cells	40	4.8	2.1e-13	7.8e-13
KEGG_PATHWAY	mmu04921:Oxytocin signaling pathway	43	5.2	2.4e-13	8.8e-13
KEGG_PATHWAY	mmu05014:Amyotrophic lateral sclerosis (ALS)	24	2.9	3.3e-13	1.2e-12
KEGG_PATHWAY	mmu04931:Insulin resistance	35	4.2	4.4e-13	1.6e-12
KEGG_PATHWAY	mmu04914:Progesterone-mediated oocyte maturation	30	3.6	2.9e-12	1.0e-11
KEGG_PATHWAY	mmu05218:Melanoma	27	3.2	3.3e-12	1.2e-11
KEGG_PATHWAY	mmu05211:Renal cell carcinoma	26	3.1	5.4e-12	1.8e-11
KEGG_PATHWAY	mmu05134:Legionellosis	24	2.9	5.7e-12	1.9e-11
KEGG_PATHWAY	mmu05230:Central carbon metabolism in cancer	25	3.0	1.3e-11	4.2e-11
KEGG_PATHWAY	mmu04930:Type II diabetes mellitus	22	2.6	1.9e-11	6.3e-11
KEGG_PATHWAY	mmu04912:GnRH signaling pathway	29	3.5	2.5e-11	7.9e-11
KEGG_PATHWAY	mmu05100:Bacterial invasion of epithelial cells	27	3.2	3.9e-11	1.3e-10
KEGG_PATHWAY	mmu04024:cAMP signaling pathway	45	5.4	4.0e-11	1.3e-10
KEGG_PATHWAY	mmu04932:Non-alcoholic fatty liver disease (NAFLD)	39	4.7	7.4e-11	2.3e-10
KEGG_PATHWAY	mmu04350:TGF-beta signaling pathway	27	3.2	3.4e-10	1.0e-9
KEGG_PATHWAY	mmu04144:Endocytosis	53	6.4	6.9e-10	2.1e-9
KEGG_PATHWAY	mmu04022:cGMP-PKG signaling pathway	39	4.7	1.1e-9	3.1e-9
KEGG_PATHWAY	mmu04390:Hippo signaling pathway	36	4.3	1.5e-9	4.4e-9
KEGG_PATHWAY	mmu04630:Jak-STAT signaling pathway	35	4.2	1.9e-9	5.4e-9
KEGG_PATHWAY	mmu04141:Protein processing in endoplasmic reticulum	37	4.4	8.3e-9	2.4e-8
KEGG_PATHWAY	mmu04310:Wnt signaling pathway	33	4.0	1.3e-8	3.7e-8
KEGG_PATHWAY	mmu05219:Bladder cancer	17	2.0	1.8e-8	5.0e-8
KEGG_PATHWAY	mmu04920:Adipocytokine signaling pathway	22	2.6	4.4e-8	1.2e-7
KEGG_PATHWAY	mmu04750:Inflammatory mediator regulation of TRP channels	30	3.6	4.6e-8	1.2e-7
KEGG_PATHWAY	mmu05202:Transcriptional misregulation in cancer	35	4.2	7.1e-8	1.9e-7
KEGG_PATHWAY	mmu04360:Axon guidance	30	3.6	8.0e-8	2.1e-7
KEGG_PATHWAY	mmu04923:Regulation of lipolysis in adipocytes	19	2.3	1.1e-7	2.8e-7
KEGG_PATHWAY	mmu04110:Cell cycle	29	3.5	1.2e-7	3.1e-7
KEGG_PATHWAY	mmu05146:Amoebiasis	28	3.4	1.3e-7	3.2e-7
KEGG_PATHWAY	mmu04261:Adrenergic signaling in cardiomyocytes	32	3.8	2.2e-7	5.5e-7
KEGG_PATHWAY	mmu04960:Aldosterone-regulated sodium reabsorption	15	1.8	6.9e-7	1.7e-6
KEGG_PATHWAY	mmu04152:AMPK signaling pathway	28	3.4	7.4e-7	1.8e-6
KEGG_PATHWAY	mmu04540:Gap junction	22	2.6	1.2e-6	2.9e-6
KEGG_PATHWAY	mmu04720:Long-term potentiation	19	2.3	1.2e-6	3.0e-6
KEGG_PATHWAY	mmu05020:Prion diseases	13	1.6	1.9e-6	4.5e-6
KEGG_PATHWAY	mmu04114:Oocyte meiosis	25	3.0	1.9e-6	4.4e-6
KEGG_PATHWAY	mmu04728:Dopaminergic synapse	28	3.4	2.2e-6	5.2e-6
KEGG_PATHWAY	mmu04725:Cholinergic synapse	25	3.0	3.1e-6	7.2e-6
KEGG_PATHWAY	mmu05206:MicroRNAs in cancer	44	5.3	4.2e-6	9.6e-6
KEGG_PATHWAY	mmu05216:Thyroid cancer	12	1.4	4.4e-6	1.0e-5
KEGG_PATHWAY	mmu04530:Tight junction	28	3.4	4.6e-6	1.0e-5
KEGG_PATHWAY	mmu04120:Ubiquitin mediated proteolysis	28	3.4	7.1e-6	1.6e-5
KEGG_PATHWAY	mmu05321:Inflammatory bowel disease (IBD)	16	1.9	2.4e-5	5.3e-5
KEGG_PATHWAY	mmu05031:Amphetamine addiction	17	2.0	3.0e-5	6.6e-5
KEGG_PATHWAY	mmu04115:p53 signaling pathway	17	2.0	3.0e-5	6.6e-5
KEGG_PATHWAY	mmu05143:African trypanosomiasis	12	1.4	3.5e-5	7.6e-5
KEGG_PATHWAY	mmu05030:Cocaine addiction	14	1.7	5.2e-5	0.00011
KEGG_PATHWAY	mmu04623:Cytosolic DNA-sensing pathway	16	1.9	6.7e-5	0.00014
KEGG_PATHWAY	mmu04730:Long-term depression	15	1.8	0.00015	0.00031
KEGG_PATHWAY	mmu05010:Alzheimer's disease	29	3.5	0.00015	0.00032
KEGG_PATHWAY	mmu05416:Viral myocarditis	17	2.0	0.00025	0.00051
KEGG_PATHWAY	mmu05340:Primary immunodeficiency	10	1.2	0.00075	0.0015
KEGG_PATHWAY	mmu04973:Carbohydrate digestion and absorption	11	1.3	0.00096	0.0019
KEGG_PATHWAY	mmu05412:Arrhythmogenic right ventricular cardiomyopathy (ARVC)	14	1.7	0.0024	0.0048
KEGG_PATHWAY	mmu05144:Malaria	11	1.3	0.0028	0.0056
KEGG_PATHWAY	mmu04916:Melanogenesis	17	2.0	0.0031	0.0061
KEGG_PATHWAY	mmu05410:Hypertrophic cardiomyopathy (HCM)	14	1.7	0.0063	0.012
KEGG_PATHWAY	mmu04270:Vascular smooth muscle contraction	19	2.3	0.0074	0.014
KEGG_PATHWAY	mmu04922:Glucagon signaling pathway	16	1.9	0.0083	0.016
KEGG_PATHWAY	mmu04320:Dorso-ventral axis formation	7	0.8	0.0096	0.018
KEGG_PATHWAY	mmu04330:Notch signaling pathway	10	1.2	0.011	0.02
KEGG_PATHWAY	mmu04723:Retrograde endocannabinoid signaling	16	1.9	0.011	0.02
KEGG_PATHWAY	mmu04070:Phosphatidylinositol signaling system	15	1.8	0.015	0.027
KEGG_PATHWAY	mmu03013:RNA transport	22	2.6	0.018	0.034
KEGG_PATHWAY	mmu05323:Rheumatoid arthritis	13	1.6	0.021	0.037
KEGG_PATHWAY	mmu04724:Glutamatergic synapse	16	1.9	0.028	0.049
KEGG_PATHWAY	mmu04918:Thyroid hormone synthesis	11	1.3	0.038	0.068
KEGG_PATHWAY	mmu03022:Basal transcription factors	8	1.0	0.047	0.082
KEGG_PATHWAY	mmu05414:Dilated cardiomyopathy	12	1.4	0.049	0.085
KEGG_PATHWAY	mmu05034:Alcoholism	23	2.8	0.056	0.095
KEGG_PATHWAY	mmu04925:Aldosterone synthesis and secretion	12	1.4	0.061	0.1
KEGG_PATHWAY	mmu04145:Phagosome	20	2.4	0.07	0.12
KEGG_PATHWAY	mmu04140:Regulation of autophagy	7	0.8	0.08	0.13
KEGG_PATHWAY	mmu05150:Staphylococcus aureus infection	8	1.0	0.083	0.14
KEGG_PATHWAY	mmu04924:Renin secretion	10	1.2	0.089	0.15
KEGG_PATHWAY	mmu03460:Fanconi anemia pathway	8	1.0	0.09	0.15
KEGG_PATHWAY	mmu04020:Calcium signaling pathway	20	2.4	0.091	0.15
KEGG_PATHWAY	mmu04612:Antigen processing and presentation	11	1.3	0.092	0.15